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DESCRIPTION
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Package: gaudi
Title: Group Aggregation via UMAP Data Integration
Version: 0.1.17
Authors@R: c(
person(given = "Pol",
family = "Castellano-Escuder",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0001-6466-877X")),
person(given = "Kevin",
family = "Han",
role = c("ctb"),
email = "[email protected]")
)
Description:
The gaudi package provides a streamlined solution for the integration and analysis of complex
multi-omics data. Leveraging the power of UMAP (Uniform Manifold Approximation and Projection),
this package offers researchers an efficient and intuitive approach to uncover hidden patterns
and relationships within diverse biological datasets. Designed for ease of use and compatibility
with existing R-based bioinformatics workflows, gaudi is ideal for both novice and experienced
users looking to dive deeper into the world of multi-omics research.
Imports:
cluster,
clusterProfiler,
dbscan,
dplyr,
ggplot2,
patchwork,
randomForest,
SHAPforxgboost,
survival,
survminer,
sva,
tibble,
tidyr,
uwot,
vegan,
xgboost
Suggests:
org.Hs.eg.db,
tidyverse
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2